“Understanding phylogenetic trees can be difficult, but we’re working to make it more accessible,” says principal investigator Chia Shen, director of Scientists’ Discovery Room (S ...

‘treeio’ is an R package to make it easier to import and store phylogenetic tree with associated data; and to link external data from different sources to phylogeny. It also supports exporting ...

The turkey has been finished, the Thanksgiving plates have been cleaned, and many Americans have turned their attention to Christmas, which brings a conundrum for some: The Christmas tree.

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Still, it’s far from the only thing to see at Joshua Tree. Dozens of trails are open to hiking, biking, and horseback riding, and the stony terrain makes it one of America’s rock climbing meccas.

After all, were it not for the 19th-century monarch, we might not celebrate Christmas with a well-appointed fir tree. Though people across the globe had been decorating temples and domestic ...

were also calculated and mapped on the phylogenetic tree constructed by FastTree. The phylogeny was visualized using the ggtree package (Yu et al., 2016).

[14:22:05] User: /python/tree$ ggtree Directory tree for: /python/tree ├── README.md ├── README.md~ ├── TestFolder1 │ └── test.txt ├── ggtree.py ├── install.sh └── uninstall.sh [14:22:07] User: ...